rstats

CDSB Workshop 2019: How to Build and Create Tidy Tools

Community of Bioinformatics Software Developers Workshop webpage: https://comunidadbioinfo.github.io/post/building-tidy-tools-CDSB-runconf-2019/ Level: intermediate - advanced Language: Spanish1 When: July 29 - August 2, 2019 Where: Auditorium of the Center for Genomic Sciences, Cuernavaca, Mexico Twitter: #CDSBMexico Facebook: @CDSBMexico GitHub: https://github.com/ComunidadBioInfo/tidy-tools-CDSB-runconf-2019 Registration Requirements Requirements prior knowledge Participants should have basic to intermediate knowledge of the R programming language: variable assignment, reading files: read.

The path from CDSBMexico 2018 to BioC2019

Last year the Community of Bioinformatics Software Developers (CDSB in Spanish) organized a one week workshop designed to train R users how to write R packages and ideally contribute them to Bioconductor. The workshop itself was a success as described in our summary post about the event. However, we didn’t want to stop there. We formed CDSB and teamed up with TIB (“Talleres Internacionales de Bioinformática”) from NNB-UNAM with the goal of simulating the BioC yearly meeting where attendees can learn R, mature as R users and become R developers.

CDSBMexico: remember to apply for BioC2019 travel scholarships

About 10 months ago we announced our plans to start a new community of R/Bioconductor developers in Mexico and Latin America. The National Bioinformatics Node (NNB-UNAM in Spanish) has organized workshops in bioinformatics and R since 2006 and more frequently since 2010. Last year, 2018, there were five simultaneous one week workshops: Introduction to R and RStudio Exploratory data analysis (EDA) of biological data with R EDA of RNA-seq data and differential expression studies

A recap of CDSB 2018: the start of a community

Organizing an event is a lot of work, much more than you plan for it. But harvesting the fruits of a successful event makes the workload worth it. In July, we kicked off the first Bioconductor Latin American Developers Workshop 2018 (LatAmBioc2018). The main goals of this meeting were to encourage the development of the Bioconductor project in Mexico and to start a community of Mexican bioinformatic software developers – the Community of Bioinformatic Software Developers (CDSB, from its acronym in Spanish).

R Gene Regulatory Interaction Formulator For Inquiring Networks

This blog post was written by ME Martinez-Sanchez, S Muñoz, M Carrillo, E Azpeitia, D Rosenblueth. In this blog post we will describe the package rGriffin (Martinez-Sanchez, Muñoz, Carrillo, Azpeitia, et al., 2018) that was one of the projects developed during the TIB2018-BCDW. We hope to continue developing Griffin and rGriffin (Martinez-Sanchez, Muñoz, Carrillo, Azpeitia, et al., 2018). If you have ideas, suggestions or bugs, please contact us via rGriffin GitHub repo.

Latin American R/BioConductor Developers Workshop 2018

Community of Bioinformatics Software Developers Workshop webpage: https://comunidadbioinfo.github.io/post/r-bioconductor-developers-workshop-2018/ Level: intermediate - advanced Language: english When: July 30 - August 3, 2018 Where: Auditorium of the Center for Genomic Sciences, Cuernavaca, Mexico Twitter: #CDSBMexico Facebook: @CDSBMexico GitHub: https://github.com/ComunidadBioInfo/R-BioConductor-Developers-Workshop-2018 Register Requirements Requirements prior knowledge Participants should have basic knowledge of programming language R: variable assignment, reading files: read.csv, read.delim, read.